BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007D08LP1|AL425688
(751 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1415 1489 0.0
>3x_Contig1415
Length = 6436
Score = 1489 bits (751), Expect = 0.0
Identities = 751/751 (100%)
Strand = Plus / Minus
Query: 1 gatctgatgtagtcaatgaccaaaccaacatcacctctggctagggccaaagtcttaccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979 gatctgatgtagtcaatgaccaaaccaacatcacctctggctagggccaaagtcttaccg 920
Query: 61 ttgtcagcagattcgatagaagcaatcaattccttttgagcttcaatcaagtcagccaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 ttgtcagcagattcgatagaagcaatcaattccttttgagcttcaatcaagtcagccaac 860
Query: 121 ttaaacaacaaagaaccacgcttttttgggtccatagtagaccattcggagttgaaagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 ttaaacaacaaagaaccacgcttttttgggtccatagtagaccattcggagttgaaagca 800
Query: 181 gcatcggcagcttcaacggcgtactcgacgtcttgagaagtagcagattggacttcgaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 gcatcggcagcttcaacggcgtactcgacgtcttgagaagtagcagattggacttcgaca 740
Query: 241 atgatttcctcagtagatgggttttcaaccttcaaagtcttaccgtcttgagacttgatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 atgatttcctcagtagatgggttttcaaccttcaaagtcttaccgtcttgagacttgatg 680
Query: 301 aactgattgttgatgaacaaaccagttggttgttggtaagtcaaaccgtttggcaaagtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 aactgattgttgatgaacaaaccagttggttgttggtaagtcaaaccgtttggcaaagtg 620
Query: 361 atgctaacagcgtcttgttcgacgatcttgaggttcaatttctcagcaattgtagaggac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 atgctaacagcgtcttgttcgacgatcttgaggttcaatttctcagcaattgtagaggac 560
Query: 421 attctctttgtaattgttgttggtgttatggtagtagcagttgtaataaacttacttgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 attctctttgtaattgttgttggtgttatggtagtagcagttgtaataaacttacttgca 500
Query: 481 cttaatgagtggacagatgcattagaactaatacatctaatcaatcctttcttagaacaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 cttaatgagtggacagatgcattagaactaatacatctaatcaatcctttcttagaacaa 440
Query: 541 ctcctttcaagagaagctctagtcaacaagcgcccagtatttatacaagttcgaatcact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ctcctttcaagagaagctctagtcaacaagcgcccagtatttatacaagttcgaatcact 380
Query: 601 aaagaaagggggaaatgtggcgagtcattacgattagctgtccagatatttccgtcgtcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aaagaaagggggaaatgtggcgagtcattacgattagctgtccagatatttccgtcgtcc 320
Query: 661 gtctccactcatgcttctttccctcttcttcactcatactctgtcgtaattatttttcag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gtctccactcatgcttctttccctcttcttcactcatactctgtcgtaattatttttcag 260
Query: 721 ctaagaaaaaaaaaagtaaccggaaggaaaa 751
|||||||||||||||||||||||||||||||
Sbjct: 259 ctaagaaaaaaaaaagtaaccggaaggaaaa 229
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6997
Number of Sequences: 1807
Number of extensions: 6997
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 1
length of query: 751
length of database: 10,358,551
effective HSP length: 16
effective length of query: 735
effective length of database: 10,329,639
effective search space: 7592284665
effective search space used: 7592284665
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)